The MCU version of Captain Marvel will have a small appearance in next week’s release of Infinity Countdown: Captain Marvel #1.
Marvel released some preview pages from the issue, including this panel showing the Brie Larson Captain Marvel in her Kree-inspired green version of the costume. The context is that in this issue the Marvel 616 Carol Danvers has the reality stone and is using it to communicate with other Captain Marvels in different universes:
Meant to tie in with Infinity War (of course) this latest Infinity event shows the current status of the Infinity Stones in the 616 Marvel Universe. It’s brought back characters such as Darkhawk to the comics and is sort of a replacement for the Guardians of the Galaxy ongoing book Marvel recently ended.